Recent Publications

Orive, M.E. (2019) The evolution of sex, in The Theory of Evolution (S.M. Scheiner and D.P. Mindell, eds.), University of Chicago Press, in press.

Agusto, F.B., M.C.A. Leite, and M.E. Orive. (2019) The transmission dynamics of a within- and between-hosts malaria model. Ecological Complexity 38:31-55,

Orive, M.E., R.D. Holt, and M. Barfield. (2018) Evolutionary rescue in a linearly changing environment: Limits on predictability. Bulletin of Mathematical Biology,

Chang, E.S., M.E. Orive, and P. Cartwright. (2018) Non-clonal coloniality: Genetically chimeric colonies through fusion of sexually produced polyps in the hydrozoan Ectopleura larynx. Evolution Letters 2(4):442-455,

Orive, M.E., M. Barfield, C. Fernandez, and R.D. Holt. (2017) Effects of clonal reproduction on evolutionary lag and evolutionary rescue. American Naturalist 190:469-490.

Carter, J. M., M.E. Orive, L.M. Gerhart, J. Stern, R.M. Marchin, J. Nagel, and J.K. Ward. (2017) Warmest extreme year in U.S. history alters thermal requirements for tree phenology. Oecologia, 183(4):1197-1210. doi:10.1007/s00442-017-3838-z

Orive, M.E. (2016) Recombination and selection, in The Encyclopedia of Evolutionary Biology (R.M. Kliman, ed.) vol. 3, pp. 417-424, Oxford: Academic Press.

Earlier Publications

Barfield, M., M.E. Orive, and R.D. Holt. (2015) The role of pathogen shedding in linking within- and between-host pathogen dynamics. Mathematical Biosciences, 270:249-262.

Marriage, T. and M.E. Orive. (2012) Mutation-selection balance and mixed mating with asexual reproduction. Journal of Theoretical Biology, 308:25-35.

Orive, M.E. (2011) Putting the R in evolutionary modeling (book review). Evolution 65(3): 912–914.

Marriage, T.N., S. Hudman, M.E. Mort, M.E. Orive, R.G. Shaw and J.K. Kelly. (2009) Direct estimation of the mutation rate at dinucleotide microsatellite loci in Arabidopsis thaliana (Brassicaceae). Heredity 103:310-317. doi: 10.1038/hdy.2009.67

Orive, M.E., M.N. Stearns, J. K. Kelly, M. Barfield, M.S. Smith and R.D. Holt.  (2005). Viral infection in internally structured hosts. I. Conditions for persistent infection. Journal of Theoretical Biology 232(4):453-466.

Williamson, S., S.M. Perry, C.D. Bustamante, M.E. Orive, M.N. Stearns, and J.K. Kelly.  (2005).  A statistical characterization of consistent patterns of human immuno-deficiency virus evolution within infected patients.  Mol. Biol. Evol. 22:456-468.

Kelly, J. K., S. Williamson, M.E. Orive, M. Smith, and R. D. Holt (2003).  Linking dynamical and population genetic models of persistent viral infection. American Naturalist 162:14-28.

Orive, M.E. and N. H. Barton (2002).  Associations between cytoplasmic and nuclear loci in hybridizing populations.  Genetics 162:1469-1485.

Williamson, S. and M.E. Orive (2002).  The genealogy of a sequence subject to purifying selection at multiple sites.  Molecular Biology and Evolution, 19:1376-1384.

Orive, M.E. (2001).  Somatic mutations in organisms with complex life histories.  Theoretical Population Biology, 59:235-249.

Asmussen, M.A. and M.E. Orive (2000).  The effects of pollen and seed migration on nuclear-dictyoplasmic systems.  I. Nonrandom associations and equilibrium structure with both maternal and paternal cytoplasmic inheritance. Genetics 155:813-831.

Orive, M.E. and M.A. Asmussen (2000). The effects of pollen and seed migration on nuclear-dictyoplasmic systems.  II. A new method for estimating plant gene flow from joint nuclear-cytoplasmic data.  Genetics 155:833-854.

Otto, S.P. and M.E. Orive (1995).  Evolutionary consequences of mutation and selection within an individual.  Genetics 141:1173 - 1187.

Orive, M.E. (1995).  Senescence in organisms with clonal reproduction and complex life histories.  American Naturalist 145:90 - 108.

Orive, M.E. (1993).  Effective population size in organisms with complex life histories.     
Theoretical Population Biology 44:316 - 340.

Orive, M.E. and J. F. Baughman (1989).  Effects of handling on Euphydryas editha. Journal of the Lepidopterists' Society  43(3):244 - 247.